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1.
Genes (Basel) ; 15(4)2024 Apr 08.
Article En | MEDLINE | ID: mdl-38674404

Mycoplasma genitalium (M. genitalium) poses a significant public health challenge due to its association with non-gonococcal urethritis (particularly in men) and antimicrobial resistance. However, despite the prevalence of M. genitalium infections and the rise in resistance rates, routine testing and surveillance remain limited. This is the first study from Croatia that aimed to assess the prevalence and trends of resistance in M. genitalium strains isolated from male individuals by detecting macrolide and fluoroquinolone resistance genes. The study also aimed to explore the factors associated with resistance and changes in resistance patterns over time. Urine samples collected from male individuals in the Zagreb County and northwest region of Croatia between 2018 and 2023 were tested for M. genitalium with the use of molecular methods. Positive samples were subjected to DNA extraction and multiplex tandem polymerase chain reaction (MT-PCR) targeting genetic mutations associated with macrolide (23S rRNA gene) and fluoroquinolone (parC gene) resistance. Of the 8073 urine samples tested from 6480 male individuals (and following the exclusion of repeated specimens), we found that the prevalence of M. genitalium infection was 2.2%. Macrolide resistance was observed in 60.4% of strains, while fluoroquinolone resistance was found in 19.2%. Co-resistance to both antibiotics was present in 18.2% of cases. A statistically significant increase in fluoroquinolone resistance was noted over the study period (p = 0.010), but this was not evident for azithromycin resistance (p = 0.165). There were no statistically significant differences in resistance patterns between age groups, whereas re-testing of patients revealed dynamic changes in resistance profiles over time. The high burden of macrolide resistance and increasing fluoroquinolone resistance underscore the urgent need for comprehensive resistance testing and surveillance programs. The implementation of resistance-guided treatment strategies, along with enhanced access to molecular diagnostics, is pivotal for effectively managing M. genitalium infections.


Anti-Bacterial Agents , Drug Resistance, Bacterial , Fluoroquinolones , Macrolides , Mycoplasma Infections , Mycoplasma genitalium , Mycoplasma genitalium/genetics , Mycoplasma genitalium/drug effects , Mycoplasma genitalium/isolation & purification , Humans , Male , Fluoroquinolones/pharmacology , Fluoroquinolones/therapeutic use , Croatia/epidemiology , Macrolides/pharmacology , Macrolides/therapeutic use , Adult , Mycoplasma Infections/microbiology , Mycoplasma Infections/epidemiology , Mycoplasma Infections/drug therapy , Mycoplasma Infections/urine , Anti-Bacterial Agents/pharmacology , Anti-Bacterial Agents/therapeutic use , Drug Resistance, Bacterial/genetics , Middle Aged , Young Adult , RNA, Ribosomal, 23S/genetics , Adolescent , Urethritis/microbiology , Urethritis/epidemiology , Urethritis/drug therapy , Microbial Sensitivity Tests
2.
Clin Microbiol Infect ; 28(1): 141.e1-141.e4, 2022 Jan.
Article En | MEDLINE | ID: mdl-34607000

OBJECTIVES: Sexually transmitted infections (STIs) can cause leukocyturia. We aimed to estimate the prevalence of leukocyturia in asymptomatic aircrews and the proportion of STIs in those presenting leukocyturia. METHODS: The LEUCO survey was a prospective cohort study conducted among aircrews between 14th October 2019 and 13th March 2020 at the Toulon aeromedical centre in France. All participants performed a dipstick urinalysis. Those positive for leukocyturia were offered STI screening by nucleic acid amplification test (NAAT) for Chlamydia trachomatis, Neisseria gonorrhoeae, Mycoplasma genitalium and Trichomonas vaginalis. RESULTS: Among the 2236 included asymptomatic participants (1912 men and 324 women), 127 (36 men and 91 women) were positive for leukocyturia. The prevalence of leukocyturia was 1.9% (1.3-2.6) in men and 28.1% (23.3-33.3) in women (p < 0.001). In men positive for leukocyturia, the NAAT positivity rate for C. trachomatis, N. gonorrhoeae, M. genitalium and T. vaginalis was 28.6% (3.7-71.0) in the age group 18-24, 20.0% (0.5-71.6) in the age group 25-34, and zero in the older age group (p 0.65). In women positive for leukocyturia it was 16.7% (4.7-37.4) in the age group 18-24, 18.2% (2.3-51.8) in the age group 25-34, and zero in the older age group (p 0.16). CONCLUSIONS: In asymptomatic individuals, leukocyturia is rare in men and more common in women. In asymptomatic adults under 35 years of age with leukocyturia, multiplex NAAT shows a high proportion of STIs and might be useful in improving STI detection.


Chlamydia Infections , Gonorrhea , Mycoplasma Infections , Sexually Transmitted Diseases , Trichomonas Infections , Urine/cytology , Adolescent , Adult , Aircraft , Chlamydia Infections/diagnosis , Chlamydia Infections/urine , Chlamydia trachomatis/genetics , Cohort Studies , Female , France , Gonorrhea/diagnosis , Gonorrhea/urine , Humans , Male , Mycoplasma Infections/diagnosis , Mycoplasma Infections/urine , Mycoplasma genitalium , Neisseria gonorrhoeae , Prevalence , Prospective Studies , Sexually Transmitted Diseases/diagnosis , Sexually Transmitted Diseases/urine , Trichomonas Infections/diagnosis , Trichomonas Infections/urine , Trichomonas vaginalis , Young Adult
3.
Sex Transm Infect ; 97(6): 434-440, 2021 09.
Article En | MEDLINE | ID: mdl-33122424

OBJECTIVES: This investigation sought to characterise risk factors associated with acquisition of traditional and emerging agents of sexually transmitted infection (STI) in a cohort of young men who have sex with men and transgender women. METHODS: 917 participants provided urine and rectal swab submissions assessed by transcription-mediated amplification (TMA)-based assays for Chlamydia trachomatis and Neisseria gonorrhoeae and by off-label TMA-based Trichomonas vaginalis and Mycoplasma genitalium testing. A subset provided specimens at 6-month and 12-month follow-up visits. RESULTS: Prevalence of M. genitalium from rectal and urine specimens (21.7% and 8.9%, respectively) exceeded that of C. trachomatis (8.8% and 1.6%) and other STI agents. Black participants yielded higher prevalence of M. genitalium (30.6%) than non-black participants (17.0%; χ²=22.39; p<0.0001). M. genitalium prevalence from rectal specimens was 41.5% in HIV-positive participants vs 16.3% in HIV-negative participants (χ²=57.72; p<0.0001). Participant age, gender identity, condomless insertive anal/vaginal sexual practice and condomless receptive anal sexual practice were not associated with rectal C. trachomatis (p≥0.10), N. gonorrhoeae (p≥0.29), T. vaginalis (p≥0.18) or M. genitalium (p≥0.20) detection. While prevalence of T. vaginalis was calculated at ≤1.0%, baseline rectal and urine screening status was predictive of detection/non-detection at follow-up. A non-reactive M. genitalium baseline rectal or urine screening result was less predictive of non-reactive follow-up versus C. trachomatis, N. gonorrhoeae and T. vaginalis. CONCLUSIONS: Rectal M. genitalium detection is associated with black race and HIV seropositivity. Baseline M. genitalium infection influences subsequent detection of the organism.


Homosexuality, Male/statistics & numerical data , Mycoplasma Infections/diagnosis , Mycoplasma genitalium/genetics , Pathology, Molecular/statistics & numerical data , Sexually Transmitted Diseases/diagnosis , Transgender Persons/statistics & numerical data , Adolescent , Adult , Cohort Studies , Female , HIV Seropositivity/epidemiology , HIV Seropositivity/microbiology , Humans , Illinois/epidemiology , Longitudinal Studies , Male , Mycoplasma Infections/microbiology , Mycoplasma Infections/transmission , Mycoplasma Infections/urine , Mycoplasma genitalium/pathogenicity , Pathology, Molecular/methods , Prevalence , Rectum/microbiology , Sexually Transmitted Diseases/microbiology , Sexually Transmitted Diseases/urine , Young Adult
4.
Int J STD AIDS ; 32(1): 83-85, 2021 01.
Article En | MEDLINE | ID: mdl-33167804

The Young People's Health Service (YPHS) is a free, nurse-led Primary Health Care Clinic, in Melbourne, for young people aged 12-24 who are experiencing homelessness. Sexually transmitted infection (STI) screening is routinely offered as part of comprehensive psychosocial assessments. We wanted to determine the number of people positive for Chlamydia trachomatis (Ct) and Mycoplasma genitalium (Mg), amongst this asymptomatic high-risk population. We also wanted to review our screening practice. All asymptomatic sexually active clients seen by YPHS between 2014 and 2016 were offered a first pass urine polymerase chain reaction-based test for Ct and Mg. Urine samples were taken for men and women. Positivity for Ct and Mg out of those tested was determined and association with gender examined. Between 2014-2016, 272 males and 278 females (n = 550) were screened for Ct, and 72 infections were detected (13.1%. Chlamydia positivity did not differ between males (n = 35; 12.9%, 95% confidence interval [CI]: 8.8-16.8) and females (n = 37; 13.3%, 95%CI: 9.3-17.3). Over the same period 273 males and 284 females were screened for Mg (n = 557) and 55 infections were detected (9.9%). A higher proportion of females (n = 35; 12.3%, 95%CI: 8.5-16.1) tested positive compared to males (n = 20; 7.3%, 95%CI: 4.2-10.4), p = 0.048. Our study demonstrates both Ct and Mg are prevalent in the population, Mg being more common in young women than young men. Referral for specialist care for macrolide-resistant Mg increased and the updated Australian STI management guidelines led to a review of practice.


Chlamydia Infections/diagnosis , Chlamydia trachomatis/isolation & purification , Mycoplasma Infections/diagnosis , Mycoplasma genitalium/isolation & purification , Sexually Transmitted Diseases/diagnosis , Adolescent , Australia/epidemiology , Child , Chlamydia Infections/epidemiology , Chlamydia trachomatis/genetics , Female , Ill-Housed Persons , Humans , Male , Mass Screening , Mycoplasma Infections/epidemiology , Mycoplasma Infections/urine , Mycoplasma genitalium/genetics , Polymerase Chain Reaction , Prevalence , Sexually Transmitted Diseases/epidemiology , Sexually Transmitted Diseases/urine , Young Adult
5.
PLoS One ; 15(12): e0242227, 2020.
Article En | MEDLINE | ID: mdl-33264307

BACKGROUND: Information about the use of flow cytometry in the diagnosis of male urethritis is scarce. The current study aims to evaluate the performance of flow cytometry on first-voided urine in males with infectious urethritis (Chlamydia trachomatis, Neisseria gonorrhoeae, Mycoplasma genitalium and Trichomonas vaginalis). METHODS: Male patients of the Andrology Centre (Tartu University Hospital, Estonia) were recruited during the period March 2015 -January 2018. Cases included 306 patients with infectious urethritis caused by Chlamydia trachomatis, Neisseria gonorrhoeae, Mycoplasma genitalium and/or Trichomonas vaginalis. The control group consisted of 192 patients without uro-genital complaints, negative tests for C. trachomatis, N. gonorrhoeae, M. genitalium and T. vaginalis from first-voided urine and no inflammation in first-voided urine, mid-stream urine and urine after prostate massage. C. trachomatis, N. gonorrhoeae, M. genitalium and T. vaginalis were detected from first-voided urine using polymerase chain reaction (PCR) method. First-voided urine was analysed using urine particle analyzer Sysmex UF-500i. RESULTS: The most prevalent infection was chlamydia (64.1%), followed by Mycoplasma genitalium (20.9%), gonorrhoea (7.8%) and trichomoniasis (1.6%). Gonorrhoea caused the highest flow-cytometric leucocyte/bacteria count, followed by chlamydia and Mycoplasma genitalium. Trichomonas vaginalis showed nearly absent inflammation in first-voided urine. Using an empiric flow-cytometry diagnostic threshold for urethritis in first-voided urine (leucocytes ≥ 15/µl and bacteria ≥ 20/µl) the total calculated sensitivity was over 90%. However, when applying such criteria for deciding whether to perform first-voided urine PCR for C. trachomatis, N. gonorrhoeae, M. genitalium and T. vaginalis or not, we could miss 23 cases with infectious urethritis that makes up 7,5% of all proven cases. CONCLUSIONS: Flow cytometry of first-voided urine can be considered as a rapid and objective screening method in case of suspected male infectious urethritis.


Heterosexuality , Inflammation/urine , Sexually Transmitted Diseases/urine , Urethritis/urine , Adolescent , Adult , Body Fluids/microbiology , Chlamydia Infections/complications , Chlamydia Infections/microbiology , Chlamydia Infections/urine , Chlamydia trachomatis/pathogenicity , Estonia/epidemiology , Gonorrhea/complications , Gonorrhea/microbiology , Gonorrhea/urine , Humans , Inflammation/etiology , Inflammation/pathology , Male , Middle Aged , Mycoplasma Infections/complications , Mycoplasma Infections/microbiology , Mycoplasma Infections/urine , Mycoplasma genitalium/pathogenicity , Neisseria gonorrhoeae/pathogenicity , Sexually Transmitted Diseases/complications , Sexually Transmitted Diseases/microbiology , Trichomonas Infections/complications , Trichomonas Infections/microbiology , Trichomonas Infections/urine , Trichomonas vaginalis/pathogenicity , Urethritis/etiology , Urethritis/microbiology , Urethritis/pathology , Young Adult
6.
Enferm. infecc. microbiol. clín. (Ed. impr.) ; 38(2): 65-71, feb. 2020. tab, graf
Article En | IBECS | ID: ibc-200495

INTRODUCTION: Bacterial sexually transmitted infections (STIs) have an important impact on reproductive health, highlighting the increase in Chlamydia trachomatis infection rates among young people. To reduce the costs of STI detection, the pooling strategy is beneficial for high-throughput tests in low-prevalence populations using non-invasive samples. OBJECTIVES: (1) To describe the performance of a 7-STI PCR assay using the pooling of three urine samples to detect C. trachomatis, Neisseria gonorrhoeae and Mycoplasma genitalium; (2) to estimate the cost saving of the pooling strategy; (3) to describe the prevalence, risk factors and coinfections of C. trachomatis, N. gonorrhoeae and M. genitalium in young people ≤ 25 years in Catalonia. METHODS: cross-sectional prevalence study conducted in 2016 among young people ≤ 25 years of age seen in sexual and reproductive health centres throughout Catalonia from pools of three urine samples. A standardized questionnaire was used to collect clinical-epidemiological and behavioural variables. RESULTS: 1032 young people were tested. The prevalence of C. trachomatis, N. gonorrhoeae and M. genitalium was 8.5%, 0.6% and 3.5%, respectively. The pooling strategy provided a 33% savings in reagent costs. CONCLUSIONS: The pooling strategy implemented for epidemiological studies in our context provides a savings that has an impact on the viability of STI detection programmes. In the same way, this study shows that C. trachomatis prevalence continues to increase in this population and, for the first time in Catalonia, the prevalence of M. genitalium in young people is shown


INTRODUCCIÓN: Las infecciones bacterianas de transmisión sexual (ITS) tienen un impacto importante en la salud reproductiva, destacando el aumento en las tasas de infección por Chlamydia trachomatis entre los jóvenes. Para reducir los costes de detección de las ITS, la estrategia de agrupación de muestras (pooling) es beneficiosa para pruebas de alto rendimiento en poblaciones de baja prevalencia utilizando muestras no invasivas. OBJETIVOS: 1) Describir el rendimiento de un ensayo de PCR 7-STI utilizando el pooling de 3 muestras de orina para detectar Chlamydia trachomatis, Neisseria gonorrhoeae y Mycoplasma genitalium; 2) Estimar el ahorro de la estrategia de pooling; 3) Describir la prevalencia, los factores de riesgo y las coinfecciones de Chlamydia trachomatis, Neisseria gonorrhoeae y Mycoplasma genitalium en jóvenes ≤ 25 años en Cataluña. MÉTODOS: Estudio transversal de prevalencia realizado durante 2016 entre jóvenes ≤ 25 años atendidos en centros de salud sexual y reproductiva en todo el territorio catalán a partir de pools de 3 muestras de orina. Se utilizó un cuestionario estandarizado para recopilar variables clínico-epidemiológicas y de comportamiento. RESULTADOS: Se testaron 1032 jóvenes. La prevalencia de Chlamydia trachomatis, Neisseria gonorrhoeae y Mycoplasma genitalium fue del 8,5, 0,6 y 3,5%, respectivamente. La estrategia de pooling proporcionó un ahorro del 33% en los costos de reactivo. CONCLUSIONES: La estrategia de pooling llevado a cabo para estudios epidemiológicos en nuestro contexto proporciona un ahorro que tiene un impacto en la viabilidad de los programas de detección de las ITS. De la misma manera, en este estudio se observa que la prevalencia de Chlamydia trachomatis continúa aumentando en esta población y, por primera vez en Cataluña, se determina la prevalencia de Mycoplasma genitalium en la población joven


Humans , Mycoplasma genitalium/isolation & purification , Mycoplasma Infections/urine , Chlamydia trachomatis/isolation & purification , Chlamydia Infections/urine , Neisseria gonorrhoeae/isolation & purification , Gonorrhea/urine , Gonorrhea/economics , Mycoplasma Infections/economics , Chlamydia Infections/economics , Mycoplasma Infections/diagnosis , Chlamydia Infections/diagnosis , Gonorrhea/diagnosis , Polymerase Chain Reaction , Cross-Sectional Studies , Risk Factors , Spain
7.
J Infect Chemother ; 26(4): 403-406, 2020 Apr.
Article En | MEDLINE | ID: mdl-31882383

The present study investigated the prevalence of Neisseria gonorrhoeae, Chlamydia trachomatis, Mycoplasma genitalium, M. hominis, and Ureaplasma spp. (biovars 1 and 2) in Japanese HIV-positive men who have sex with men (MSM). One-hundred-and-six Japanese HIV-infected MSM patients were enrolled. Anal and urine samples were collected and DNA testing for each microorganism was performed. Questionnaires regarding lifestyle habits and sexual behavior were administered. The prevalence of N. gonorrhoeae, C. trachomatis, M. genitalium, M. hominis, and Ureaplasma spp. in the anus was 5.6%, 8.9%, 4.4%, 5.6%, and 8.9%, respectively. A history of genital warts was an independent risk factor for detection of Mycoplasma spp. and Ureaplasma spp. The prevalence of these microorganisms in the anus of asymptomatic Japanese HIV-positive MSM was relatively high in agreement with previous reports from other countries.


Anal Canal/immunology , HIV Infections/microbiology , Adult , Chlamydia Infections/urine , Chlamydia trachomatis/isolation & purification , Gonorrhea/urine , HIV Infections/complications , HIV Infections/urine , Humans , Male , Middle Aged , Mycoplasma Infections/urine , Mycoplasma genitalium/isolation & purification , Mycoplasma hominis/isolation & purification , Neisseria gonorrhoeae/isolation & purification , Sexual and Gender Minorities , Ureaplasma Infections/urine , Ureaplasma urealyticum/isolation & purification , Young Adult
8.
J Clin Microbiol ; 57(11)2019 11.
Article En | MEDLINE | ID: mdl-31484702

A prospective multicenter clinical study involving subjects from 21 sites across the United States was conducted to validate the performance of a new in vitro diagnostic nucleic acid amplification test (NAAT) for the detection of Mycoplasma genitalium Seven urogenital specimen types (n = 11,556) obtained from 1,778 females, aged 15 to 74 years, and 1,583 males, aged 16 to 82 years, were tested with the Aptima Mycoplasma genitalium assay, an investigational transcription-mediated amplification (TMA) NAAT for the detection of M. genitalium 16S rRNA. Infected status for enrolled subjects was established using results obtained from testing either self-collected vaginal swab or clinician-collected male urethral swab specimens with a composite reference method consisting of three transcription-mediated amplification NAATs targeting unique regions of M. genitalium 16S or 23S rRNA. M. genitalium prevalence was 10.2% in females and 10.6% in males; prevalence was high in both symptomatic and asymptomatic subjects for both sexes. Compared to the subject infected status standard, the investigational test had sensitivity and specificity estimates, respectively, of 98.9% and 98.5% for subject-collected vaginal swabs, 92.0% and 98.0% for clinician-collected vaginal swabs, 81.5% and 98.3% for endocervical swabs, 77.8% and 99.0% for female urine, and 98.2% and 99.6% for male urethral swabs, 88.4% and 97.8% for self-collected penile meatal swabs, and 90.9% and 99.4% for male urine specimens. For all seven specimen types, within-specimen positive and negative agreements between the investigational test and the composite reference standard ranged from 94.2% to 98.3% and from 98.5 to 99.9%, respectively. These results provide clinical efficacy evidence for the first FDA-cleared NAAT for M. genitalium detection in the United States.


Molecular Diagnostic Techniques/standards , Mycoplasma Infections/diagnosis , Mycoplasma Infections/microbiology , Nucleic Acid Amplification Techniques/standards , Adolescent , Adult , Aged , Aged, 80 and over , Cross-Sectional Studies , Female , Humans , Male , Middle Aged , Molecular Diagnostic Techniques/methods , Mycoplasma Infections/epidemiology , Mycoplasma Infections/urine , Mycoplasma genitalium , Nucleic Acid Amplification Techniques/methods , Prevalence , Prospective Studies , RNA, Ribosomal, 16S/genetics , RNA, Ribosomal, 23S/genetics , Sensitivity and Specificity , Sexually Transmitted Diseases/diagnosis , Sexually Transmitted Diseases/microbiology , United States/epidemiology , Urethra/microbiology , Vagina/microbiology , Young Adult
10.
Rev Esp Quimioter ; 32(4): 327-332, 2019 Aug.
Article En | MEDLINE | ID: mdl-31271277

OBJECTIVE: Several studies have reported greater success of fertilisation by ART in couples who were not infected by Ureaplasma. Increased semen quality and better results have also been observed in couples who were treated with antibiotics to eradicate the infection. The aim of this study was to determine the prevalence of genital mycoplasmas in urine samples from male partners enrolled in the Assisted Reproduction Program (ARP) in our healthcare area so that, positive cases can be treated prior to the use of ART in order to increase the quality of semen, improve the embryo implantation rates and minimize the risk of adverse effects during pregnancy. METHODS: This study included couples enrolled in the ARP during 2016. Mycoplasma detection was made using real-time PCR. In positive cases, both members of the couple were treated with antibiotics until eradication of the microorganism. The antibiotics used were: azithromycin, doxycycline, levofloxacin, moxifloxacin, and clindamycin. RESULTS: Of the 205 men studied, 33 were positive: Ureaplasma urealyticum 15.1%, Mycoplasma hominis 3.9%. Eradication treatment with azithromycin failed in 50% compared to 10.2% for doxycycline. Of the 5 cases treated with levofloxacin, only 2 achieved elimination of U. urealyticum. CONCLUSIONS: We consider that genital mycoplasma routine screening could be useful in order to increase the quality of semen which could simplify the in vitro fertilisation procedures and raise the success rate of embryo implantation and pregnancy, especially when fast, sensitive and specific technics as real time PCR are used.


Anti-Bacterial Agents/therapeutic use , Genital Diseases, Male/drug therapy , Mycoplasma Infections/drug therapy , Reproductive Techniques, Assisted , Semen Analysis , Adult , Azithromycin/therapeutic use , Clindamycin/therapeutic use , Doxycycline/therapeutic use , Embryo Implantation , Female , Genital Diseases, Female/drug therapy , Genital Diseases, Female/epidemiology , Genital Diseases, Female/microbiology , Genital Diseases, Male/epidemiology , Genital Diseases, Male/microbiology , Genital Diseases, Male/urine , Humans , Levofloxacin/therapeutic use , Male , Middle Aged , Moxifloxacin/therapeutic use , Mycoplasma Infections/epidemiology , Mycoplasma Infections/urine , Mycoplasma hominis/drug effects , Mycoplasma hominis/genetics , Mycoplasma hominis/isolation & purification , Prevalence , Real-Time Polymerase Chain Reaction , Sex Factors , Treatment Outcome , Ureaplasma Infections/drug therapy , Ureaplasma Infections/epidemiology , Ureaplasma Infections/urine , Ureaplasma urealyticum/drug effects , Ureaplasma urealyticum/genetics , Ureaplasma urealyticum/isolation & purification , Young Adult
11.
J Clin Microbiol ; 57(8)2019 08.
Article En | MEDLINE | ID: mdl-31018983

Mycoplasma genitalium is a sexually transmitted bacterium linked to adverse sexual and reproductive health outcomes in women and men. M. genitalium is difficult to culture, and in the absence of validated amplified molecular methods for diagnosis of infection, there is no reference standard available for use as a comparator for the validation of new M. genitalium diagnostic tests. We evaluated the analytical and clinical performance of three transcription-mediated amplification (TMA) tests for M. genitalium, each targeting unique rRNA sequences, for use as a composite comparator for clinical validation of the Aptima Mycoplasma genitalium (AMG) assay, an in vitro diagnostic (IVD) TMA test that targets 16 s rRNA of M. genitalium Analytical sensitivity, specificity, and strain inclusivity of all four TMA tests were determined using nine laboratory strains of M. genitalium and 56 nontarget bacteria, protozoa, and viruses. Analytical sensitivity of the tests for M. genitalium ranged from 0.017 to 0.040 genome equivalents/ml. None of the nontarget organisms evaluated cross-reacted with any test. A composite comparator reference standard consisting of the 3 alternate (Alt) TMA tests was used to evaluate the clinical performance of the AMG assay by testing residual vaginal swab, female urine, and male urine specimens obtained from 1,400 adult subjects from three U.S. clinical sites. Using this reference standard to establish infected specimen status, the sensitivity, specificity, and overall agreement of the AMG IVD assay were 100%, 99.9%, and 99.9%, respectively. These results demonstrate the utility of molecular composite reference standard methodology for the clinical validation of future IVD tests for this organism.


Mycoplasma Infections/diagnosis , Mycoplasma genitalium/genetics , Nucleic Acid Amplification Techniques/methods , Nucleic Acid Amplification Techniques/standards , Transcription, Genetic , Adult , Female , Humans , Male , Mycoplasma Infections/microbiology , Mycoplasma Infections/urine , Penis/microbiology , RNA, Ribosomal, 16S/genetics , Sensitivity and Specificity , Specimen Handling , Vagina/microbiology
12.
Sex Transm Dis ; 46(4): e35-e37, 2019 04.
Article En | MEDLINE | ID: mdl-30676483

This is the first prevalence study of Mycoplasma genitalium and antimicrobial resistance study in Ireland. In urine samples from men who have sex with men (n = 400) attending a sexually transmitted disease clinic in Dublin, the prevalence of M. genitalium was 3% (12 of 400 specimens; 95% confidence interval, 1.3-4.7%), and the prevalences of macrolide resistance (75%), fluoroquinolone resistance (33.3%), and multidrug resistance (33.3%) were very high.


Anti-Bacterial Agents/pharmacology , Drug Resistance, Multiple, Bacterial/genetics , Mycoplasma Infections/epidemiology , Mycoplasma genitalium/drug effects , Adult , Cross-Sectional Studies , DNA, Bacterial , Fluoroquinolones/pharmacology , Homosexuality, Male , Humans , Ireland/epidemiology , Macrolides/pharmacology , Male , Middle Aged , Mutation , Mycoplasma Infections/microbiology , Mycoplasma Infections/urine , Mycoplasma genitalium/genetics , Prevalence , RNA, Ribosomal, 23S/genetics , Young Adult
13.
Ann Clin Microbiol Antimicrob ; 17(1): 25, 2018 Jun 04.
Article En | MEDLINE | ID: mdl-29866110

BACKGROUND: Miscarriage and preterm delivery are the most important challenges of pregnancy. Different bacterial and viral infection may cause miscarriage and preterm delivery. Among bacterial factors, Mycoplasma genitalium and Chlamydia trachomatis have the most important role and human papilloma virus (HPV) is the leading viral factor in this regard. METHODS: First void urine samples were collected from 119 pregnant women who visited health centers for routine first-trimester screening (12-14 weeks gestation). About 10 ml of the sample was centrifuged at 3000×g for 20 min and 1-2 ml of the sediment was transferred to sterile microfuges and stored at - 20 °C until analysis. DNA extraction was conducted using A101211 kits imported by Pars Tous Biotechnology Company. The following commercial kits, imported by Pars Tous Biotechnology, were used for PCR. RESULTS: There is no significant association between urinary isolation of C. trachomatis and miscarriage (P = 0.93) and there is no significant association between urinary isolation of M. genitalium and miscarriage (P = 0.80). Regarding HPV, since all urine samples were PCR-negative, comparison was not possible. C. trachomatis was isolated from the urine samples of 6.72% of the pregnant women who underwent first-trimester screening in health centers using PCR. Previous studies reported a mean chlamydia isolation rate of 3% from urine specimens collected from pregnant women in general. T test showed no significant difference between the two groups (P = 0.10). Based on present study the mycoplasma isolation rate was 17.65% using PCR. Previous studies reported a mean mycoplasma isolation rate of 10% from urine specimens collected from pregnant women in general. T-test showed a significant difference between the two groups (P = 0.03). DISCUSSION: First void urine samples in pregnant women may be an appropriate sample for detection of C. trachomatis and M. genitalium; however, it is not a good method for HPV isolation therefore vaginal or cervical discharge specimens should be used instead for detection of HPV.


Chlamydia Infections/diagnosis , DNA, Bacterial/urine , DNA, Viral/urine , Mycoplasma Infections/diagnosis , Papillomavirus Infections/diagnosis , Pregnancy Complications, Infectious/diagnosis , Abortion, Spontaneous/microbiology , Adult , Chlamydia Infections/urine , Chlamydia trachomatis/genetics , Chlamydia trachomatis/isolation & purification , DNA, Bacterial/genetics , DNA, Viral/genetics , Female , Humans , Mycoplasma Infections/urine , Mycoplasma genitalium/genetics , Mycoplasma genitalium/isolation & purification , Obstetric Labor, Premature/microbiology , Papillomaviridae/genetics , Papillomaviridae/isolation & purification , Papillomavirus Infections/urine , Polymerase Chain Reaction/methods , Pregnancy , Pregnancy Complications, Infectious/microbiology , Pregnancy Trimester, First
14.
Sex Health ; 14(6): 502-506, 2017 11.
Article En | MEDLINE | ID: mdl-28697843

Background Patient self-sampling allows for remote collection and return to clinic or laboratory by post. Urine samples, although convenient, are challenging to post. This study evaluated UriSwab (Copan, Brescia, Italy) as a collection and transport vessel for Chlamydia trachomatis (CT), Neisseria gonorrhoeae (NG) and Mycoplasma genitalium (MG) detection by polymerase chain reaction, compared with flocked swab and neat urine. METHODS: Five replicates of each specimen type were prepared from previously characterised urine samples (n=330), stored at room temperature (RT) or 37°C, then extracted on day 1, 3, 7, 10 and 16 (VERSANT kPCR Sample Prep System, Siemens, Munich, Germany). Crossing thresholds (Cq) from CT and NG detection (VERSANT CT/GC DNA 1.0 assay kit, Siemens) and MG detection (real-time polymerase chain reaction assay) were compared using logistic regression, stratified by sample type, temperature and analyte. Mixed-model statistical techniques were used to assess correlation between repeated observations. RESULTS: UriSwab showed an increasing trend in Cq values at RT and 37°C for CT and NG, and RT for MG (all P<0.01). UriSwab was not statistically significantly different to neat urine, except CT at RT (0.83, 95% confidence interval: 0.51-1.15). Flocked swab similarly showed increasing Cq values at 37°C for CT, a significant decreasing trend at RT for MG and increasing trend at 37°C for MG. Flocked swab was not statistically significantly different from neat urine at RT and 37°C for CT and MG. CONCLUSION: UriSwab allows transport of urine for CT, NG and MG detection regardless of storage time or temperature, suggesting that CT and NG are stable for up to 16 days and MG up to 10 days.


Chlamydia Infections/urine , Chlamydia trachomatis/isolation & purification , Gonorrhea/urine , Mycoplasma Infections/urine , Mycoplasma genitalium/isolation & purification , Neisseria gonorrhoeae/isolation & purification , Nucleic Acid Amplification Techniques , Specimen Handling/methods , Urine Specimen Collection/methods , Humans
16.
Infect Dis Obstet Gynecol ; 2016: 8382469, 2016.
Article En | MEDLINE | ID: mdl-27829780

Objective. Increasing macrolide resistant strains of Mycoplasma genitalium is a challenge, and to differentiate between treatment failure and reinfection a timely test of cure (TOC) is warranted. The aim of this study was to evaluate the best time for TOC after five days' treatment of Mycoplasma genitalium infection with azithromycin. Methods. Nineteen patients with positive PCR for Mycoplasma genitalium in urine provided urine samples daily for 2 weeks and on days 21, 28, and 35. Samples were tested by a commercial qPCR and by sequencing of the 23S rRNA gene. Results. Eight patients with a wild type of Mycoplasma genitalium responded successfully within four days after treatment initiation. Eleven patients had a mutation in the 23S rRNA gene. These samples exhibited high variations in bacterial load, and some patients tested negative at several time points during the observation period. Conclusions. Day-to-day fluctuations in the mutation samples allow for false negative TOC during the first 5 weeks after start of treatment. Due to increasing macrolide resistance of Mycoplasma genitalium, pretreatment mutation analysis is recommended. When a wild type is verified, TOC performed one week after initiation of treatment is suggested.


Bacterial Load , Mycoplasma Infections/microbiology , Mycoplasma Infections/urine , Mycoplasma genitalium/genetics , Adolescent , Adult , Female , Humans , Male , Mutation/genetics , Young Adult
17.
Sex Transm Infect ; 90(1): 3-7, 2014 Feb.
Article En | MEDLINE | ID: mdl-24106340

OBJECTIVE: Doxycycline, one of two recommended therapies for non-gonococcal urethritis (NGU), consists of a 7-day course of therapy (100 mg BID). Since suboptimal adherence may contribute to poor treatment outcomes, we examined the association between self-reported imperfect adherence to doxycycline and clinical and microbiologic failure among men with NGU. METHODS: Men aged ≥16 years with NGU attending a Seattle, WA, sexually transmitted diseases clinic were enrolled in a double-blind, parallel-group superiority trial from January 2007 to July 2011. Men were randomised to active doxycycline/placebo azithromycin or placebo doxycycline/active azithromycin. Imperfect adherence was defined as missing ≥1 dose in 7 days. Urine was tested for Chlamydia trachomatis (CT), Mycoplasma genitalium (MG), and Ureaplasma urealyticum-biovar 2 (UU-2) using nucleic acid amplification tests. Clinical failure (symptoms and ≥5 PMNs/HPF or discharge) and microbiologic failure (positive tests for CT, MG, and/or UU-2) were determined after 3 weeks. RESULTS: 184 men with NGU were randomised to active doxycycline and provided data on adherence. Baseline prevalence of CT, MG and UU-2 was 26%, 13% and 27%, respectively. 28% of men reported imperfect adherence, and this was associated with microbiologic failure among men with CT (aRR=9.33; 95% CI 1.00 to 89.2) and UU-2 (aRR=3.08; 95% CI 1.31 to 7.26) but not MG. Imperfect adherence was not significantly associated with clinical failure overall or for any specific pathogens, but it was more common among imperfectly adherent men with CT (aRR=2.63; 0.93-7.41, p=0.07). CONCLUSIONS: Adherence may be important for microbiologic cure of select pathogens. Factors other than adherence should be considered for CT-negative men with persistent NGU.


Anti-Bacterial Agents/administration & dosage , Azithromycin/administration & dosage , Doxycycline/administration & dosage , Medication Adherence , Urethritis/drug therapy , Urine/microbiology , Adolescent , Adult , Anti-Bacterial Agents/adverse effects , Azithromycin/adverse effects , Chlamydia Infections/drug therapy , Chlamydia Infections/urine , Cohort Studies , Doxycycline/adverse effects , Humans , Male , Middle Aged , Mycoplasma Infections/drug therapy , Mycoplasma Infections/urine , Nucleic Acid Amplification Techniques , Polymerase Chain Reaction , Prospective Studies , Regression Analysis , Treatment Failure , Ureaplasma Infections/drug therapy , Ureaplasma Infections/urine
18.
Article Ru | MEDLINE | ID: mdl-23805671

AIM: Study of possibility of generalization of mycoplasma infection in patients with urogenital pathology. MATERIALS AND METHODS: Among the examined patients 5 males characterized by risky sexual behavior with pronounced symptoms of infection or without those were selected. Patients were examined by a complex of methods for the presence of mycoplasma infection by culture, PCR, DFA, PHA, AHR and by detection of specific immune complexes in blood sera. Scrapes from urogenital tract, blood sera samples, urine, saliva, prostatic fluid were materials for the study. RESULTS: In blood of all patients in ELISA antibodies against Mycoplasma hominis were detected; in PHA they were detected only in 2 individuals. In all the patients in blood CIC were detected including antigens and DNA of one or several mycoplasma species. Sperm of 3 individuals was infected by Ureaplasma spp., 2--M. genitalium. In saliva of 2 individuals M. hominis was detected, 3--U. urealyticum. CONCLUSION: In all the examined patients the infection was shown to have generalized character. This phenomenon presents itself as quite significant because mycoplasma may cause anti-apoptotic and oncogenic effect.


Mycoplasma Infections/microbiology , Mycoplasma genitalium/isolation & purification , Mycoplasma hominis/isolation & purification , Ureaplasma Infections/microbiology , Ureaplasma urealyticum/isolation & purification , Adult , Antibodies, Bacterial/blood , Antigen-Antibody Complex/blood , Enzyme-Linked Immunosorbent Assay , Humans , Male , Mycoplasma Infections/blood , Mycoplasma Infections/immunology , Mycoplasma Infections/urine , Mycoplasma genitalium/growth & development , Mycoplasma hominis/growth & development , Polymerase Chain Reaction , Prostate/metabolism , Prostate/microbiology , Risk-Taking , Saliva/microbiology , Spermatozoa/microbiology , Ureaplasma Infections/blood , Ureaplasma Infections/immunology , Ureaplasma Infections/urine , Ureaplasma urealyticum/growth & development
19.
Epidemiol Infect ; 140(6): 1141-6, 2012 Jun.
Article En | MEDLINE | ID: mdl-21791147

The aim of this study was determine the prevalence of Mycoplasma hominis, M. genitalium, M. fermentans, M. pirum, M. penetrans and Ureaplasma urealyticum in HIV-infected patients. Culture and PCR were used to detect six species of Mycoplasma in first-void urine of HIV-1 infected men. A total of 497 HIV/AIDS patients (age range 5-75 years, mean 37 years) were screened in the study. All presented positive for at least one kind of mycoplasma, especially U. urealyticum and M. hominis. Six mycoplasmas were significant in the homosexual contact and heterosexual contact groups. The distribution of M. hominis, M. penetrans, and M. pirum were significantly different in this four-transmission category. CD4+ cell count levels were lower in the AIDS-associated Mycoplasma-positive group than in the Mycoplasma-negative group (P<0.01). This study indicates that U. urealyticum, M. hominis and M. fermentans are prevalent in HIV-1-infected male patients. This may be an indication of whether mycoplasmas are co-factors in the progression of HIV disease.


HIV Infections/complications , HIV Infections/urine , HIV-1 , Mycoplasma Infections/complications , Mycoplasma Infections/urine , Mycoplasma/isolation & purification , Adolescent , Adult , CD4 Lymphocyte Count , Child , Child, Preschool , Humans , Male , Middle Aged , Prevalence , Young Adult
20.
J Med Microbiol ; 58(Pt 1): 117-120, 2009 Jan.
Article En | MEDLINE | ID: mdl-19074662

The aim of this study was to determine whether a patient's endocervical swab specimen can be transported in first void urine (FVU) as combined specimens for the detection of Mycoplasma genitalium by real-time PCR. The study also compared two different DNA extraction methods for observation of possible PCR inhibition. Three specimens, one endocervical swab specimen transported in 2-SP medium, one endocervical swab specimen transported in FVU and a FVU specimen, were collected from 329 women. All sample types underwent manual DNA extraction whereas in the DNA extraction study, 329 endocervical swab specimens transported in FVU were subjected to both manual Chelex and automated BioRobot M48 DNA extraction. A total of 100 endocervical swab specimens transported in FVU from patients PCR-negative for M. genitalium in the study were used in the PCR inhibition analysis. M. genitalium was detected in 25/329 (7.6 %) women. The endocervical swab specimens transported in 2-SP medium and transported in FVU were positive for M. genitalium in 17/25 (68 %) and 24/25 (96 %) women, respectively. The FVU specimens alone were positive for M. genitalium in 22/25 (88 %) women. In the DNA extraction study, M. genitalium DNA was detected in 24/329 (7.3 %) and 28/329 (8.5 %) of endocervical swab specimens transported in FVU subjected to manual Chelex extraction and automated BioRobot M48 extraction, respectively. Partial PCR inhibition was detected in 6 % of samples subjected to manual Chelex extraction whereas no inhibition was detected with the automated BioRobot M48 extraction. Thus endocervical swab specimens transported in FVU demonstrate higher sensitivity than FVU specimens only and have considerably increased sensitivity compared with endocervical swab specimens transported in 2-SP medium for detection of M. genitalium DNA. Moreover, automated BioRobot M48 extraction was shown to be superior to a crude manual Chelex extraction, leaving no PCR inhibition and giving a slightly higher DNA yield and/or better sensitivity.


Cervix Uteri/microbiology , Mycoplasma Infections/diagnosis , Mycoplasma genitalium/isolation & purification , Polymerase Chain Reaction , Specimen Handling/methods , Adolescent , Adult , Aged , DNA, Bacterial/isolation & purification , Female , Humans , Middle Aged , Mycoplasma Infections/urine , Vaginal Diseases/diagnosis , Vaginal Diseases/microbiology
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